PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G040300.1.p
Common NamePRUPE_ppa019552mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 231aa    MW: 26152 Da    PI: 8.4812
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G040300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.22.5e-124395155
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                        ++ +hn+ Er  R++iN+ +++Lr+llP      + kKls  +   +Av+YI +Lq
  Prupe.7G040300.1.p 43 KKLNHNASERDDRKKINTLYSTLRSLLPAsY---QMKKLSNPAAISRAVKYIPELQ 95
                        6789*************************66...9999***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.9994294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.07E-1543119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-104395IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-1343118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.34E-114399No hitNo description
SMARTSM003532.1E-748100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MINEGNEFAE SFLHCVSPHQ RVDQFEFTPS SPMSGGRDLT VVKKLNHNAS ERDDRKKINT  60
LYSTLRSLLP ASYQMKKLSN PAAISRAVKY IPELQQQVKG LIQKKEELLS RLRRLQQQGD  120
PIYNEKQSRS AALSSLSASA FAVSWLNDRE VVLQISSYVV QKSPLSQILV DLEEDGLLLL  180
NASSFESFEG RLFCSLHIQV ERTCRMECNI LNEKNIIPLM CDRRKGCFPC *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007203256.11e-170hypothetical protein PRUPE_ppa019552mg, partial
SwissprotQ9M1K15e-46ORG2_ARATH; Transcription factor ORG2
TrEMBLM5WCF61e-170M5WCF6_PRUPE; Uncharacterized protein (Fragment)
STRINGVIT_08s0007g05300.t012e-70(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24023379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-32bHLH family protein